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TPA-0001 ORG-0003 TPA-0002 ORG-0004 TPA-0003 ORG-0005 TPA-0004 ORG-0006 TPA-0005 ORG-0007 TPA-0006 ORG-0008 TPA-0007 ORG-0009 TPA-0008 ORG-0010 TPA-0009 ORG-0011 TPA-0010 ORG-0012 29 http://www.oikeus.fi/markkinaoikeus ORG-0001 Markkinaoikeus Radanrakentajantie 5 Helsinki 00520 FI1B1 FIN 3006157-6 +358 295643300 markkinaoikeus@oikeus.fi false false https://www.luke.fi ORG-0002 Luonnonvarakeskus (Natural Resources Institute Finland) PL 2 (Latokartanonkaari 9) Helsinki 00791 FI1B1 FIN 0244629-2 Hansel Oy +358 294444300 kilpailutus@hansel.fi large ORG-0003 Helsingin yliopisto Fabianinkatu 33 Helsingin yliopisto 00014 FI1B1 FIN FI03134717 sme ORG-0004 Prebiomics s.r.l. Via della Cooperazione 53, Trento Via della Cooperazione 53, Trento 38123 ITH20 ITA 02481930226 medium ORG-0005 GENEWIZ Germany GmbH Bahnhofstrasse 86 Leipzig 04158 DED52 DEU 317905342 sme ORG-0006 Novogene GmbH Am Klopferspitz 19a Planegg, Munich 82152 DE21H DEU 363337480 sme ORG-0007 Biomarker Technologies BMK GmbH BioZ, Johann-Krane Weg 42 Münster Germany 48149 DE212 DEU 353057045 large ORG-0008 Turun yliopisto, Turun Biotiedekeskus, Funktionaalisen genomiikan keskus Tykistökatu 6A Turku 20520 FI1C1 FIN FI02458963 sme ORG-0009 Edinburgh Genetics Limited Pentlands Science Park Penicuik EH26 0PZ GBR 339658161 sme ORG-0010 GenoScreen 1 rue du Professeur Calmette Lille 59000 FRE11 FRA 61433996220 large ORG-0011 Suomen molekyylilääketieteen yksikkö Tukholmankatu 8 Helsinki 00290 FI1B1 FIN 0313471-7 sme ORG-0012 IGA Technology Services via Jacopo Linussio 51 via Jacopo Linussio 51 33100 ITH42 ITA 2584950303 http://hankintailmoitukset.fi ORG-0013 Hansel Oy (Hilma) Mannerheiminaukio 1a Helsinki 00100 FI1B1 FIN FI09880841 eSender 029 55 636 30 tekninen@hankintailmoitukset.fi 00596713-2026167/20262026-08-31+02:00 2.3 eforms-sdk-1.13 41463453-9709-4897-b202-1fd05af61a8c 9abbea8a-538c-4c3c-83aa-c9b6d8613090 2026-08-28+00:00 07:57:59+00:00 01 32014L0024 can-standard ENG body-pl-cga gen-pub ORG-0002 ted-esen ORG-0013 The procurement procedure used is an open procedure, in which the contracting authority publishes a contract notice and makes available an invitation to tender, on the basis of which all interested tenderers may submit a tender. The estimated total value of the procurement during the contract period, including option periods, is EUR 2 500 000€ - 3 000 000€ (excluding VAT) for all lots combined. This figure is a non-binding estimate. The contracting authority shall combine the lots into a single framework agreement if the same tenderer has been selected as the supplier for several lots. The operating model for the framework agreement is described in Annex A, "Framework Agreement". See also the section "Other information" - "Grounds for decision" in the invitation to tender. open 81ad9683-b326-4909-bc93-6539eeee6189-01 false 1716/02 10 01 00 05/2025 Sequencing services The Natural Resources Institute Finland (Luke) is procuring Sequencing services as specified in this invitation to tender and its appendices. SUBJECT OF THE PROCUREMENT This framework arrangement covers Sequencing services as defined in this invitation to tender and its appendices. Luke is looking for suppliers for the following services: 1) Metagenomic sequences short and long reads 2) Transcriptomic short reads 3) Transcriptomic long reads with ≥Q30 (80%) 4) Amplicon and metabarcoding short reads 5) Amplicon and metabarcoding long reads with ≥Q30 (80%) 6) Sanger sequencing 7) Whole genome sequencing short reads 8) Whole genome sequencing long reads 9) Sequencing of self-made pooled libraries short reads (medium through put) 10) Sequencing of self-made pooled libraries short reads (high through put) 11) Sequencing of self-made pooled libraries short reads (low through put) 12) Sequencing of self-made pooled libraries long reads with ≥Q30 (80%) 13) ATAC Interested suppliers can take part in either one or all of the service packages. The scope of the procurement is described in more detail particularly in Annex 1 "Description of the procurement". services The total value of the procurement 3 000 000€ applies, and it cannot be broken down by lots. In this notice the total value of the procurement 3 000 000€ is divided among lots, but the values of the each lot may vary. 3000000 73110000 73111000 anyw-eea LOT-0001 false no-eu-funds poi-exa 70 price Total comparison price Total comparison price from the Annex 2 “Prices”, sheet “Prices LOT1 (Metagenomic) cell I32. poi-exa 30 quality Quality of the service Annex 3 “Additional services”, tenderer’s points cell E23. An organization that provides additional information on the deadlines for appeal procedures: Natural Resources Institute Finland ORG-0002 ORG-0001 true false none fa-mix 1-0 1. Metagenomic sequencing short and long reads Supplier for sequencing services for metagenomic sequences. (DNA extracted from e.g. soil, water, ice, snow, plant air traps/root/stem, gut of the organism.) Target is metagenomic sequencing and sequencing library preparation. Both Long reads (PacBio or similar) and short reads (Illumina/AVITI or similar) or combination of this are part of this procurement. Maximum turnaround time is 4 weeks. Turnaround time begins when the supplier has received the sample and has checked the sample quality (quality check must be done within 2 workdays). Turnaround time ends when the supplier has completed the sequencing and notified that the results are ready. Maximum turnaround time applies when there are equal or less than 192 samples. If there are more than 192 samples the supplier must give estimation of the turnaround time. services 73110000 73111000 anyw-eea 48 LOT-0002 false no-eu-funds poi-exa 60 price Total comparison price Total comparison price from the Annex 2 “Prices”, sheet “Prices LOT2 (Transcriptomic) cell I37. poi-exa 40 quality Quality of the service Annex 3 “Additional services”, tenderer’s points cell E23. ORG-0002 ORG-0001 true false none fa-mix 2-1 2. Transcriptomic short reads Provider for sequencing services for transcriptomic. (RNA extracted from e.g. different tissues of plant or animals or soil.) Transcriptomic library preparation using totalRNA as starting material for e.g. total RNA metatranscriptomics, gene expression profiling, rRNA depletion or Poly A (+) RNA enrichment , lncRNA, miRNA. Sequencing of libraries using Illumina/AVITI or similar or Pac-Bio or similar. Maximum turnaround time is 4 weeks. Turnaround time begins when the supplier has received the sample and has checked the sample quality (quality check must be done within 2 workdays). Turnaround time ends when the supplier has completed the sequencing and notified that the results are ready. Maximum turnaround time applies when there are equal or less than 192 samples. If there are more than 192 samples the supplier must give estimation of the turnaround time. services 73110000 73111000 anyw-eea 48 LOT-0003 false no-eu-funds poi-exa 70 price Total comparison price Total comparison price from the Annex 2 “Prices”, sheet “Prices LOT4 (Amplicon metabar) cell I31. poi-exa 30 quality Quality of the service Annex 3 “Additional services”, tenderer’s points cell E23. ORG-0002 ORG-0001 true false none fa-mix 4-2 4. Amplicon and metabarcoding short reads Provider for sequencing services for amplicons and metabarcoding from various sources. (The sample matrix is DNA or eDNA.), including: a. Fungi b. Bacteria c. Animals, protozoa, microscopic animals d. Animal droppings (mammalian identification) e. Plants Amplicons and metabarcoding. PCR of gene of interest, including but not limited to 16S rRNA, 18S rRNA, COI, ITS from bacteria, archaea, fungi, protist, fish, mammals, insects. Maximum turnaround time is 4 weeks. Turnaround time begins when the supplier has received the sample and has checked the sample quality (quality check must be done within 2 workdays). Turnaround time ends when the supplier has completed the sequencing and notified that the results are ready. Maximum turnaround time applies when there are equal or less than 192 samples. If there are more than 192 samples the supplier must give estimation of the turnaround time. services 73110000 73111000 anyw-eea 48 LOT-0004 false no-eu-funds poi-exa 70 price Total comparison price Total comparison price from the Annex 2 “Prices”, sheet “Prices LOT6 (Sanger) cell I27. poi-exa 30 quality Quality of the service Annex 3 “Additional services”, tenderer’s points cell E23. ORG-0002 ORG-0001 true false none fa-mix 6-3 6. Sanger sequencing Provider for sequencing services for Sanger sequencing of PCR-fragments and plasmids. Maximum turnaround time is 2 weeks. Turnaround time begings when the supplier has received the sample. Turnaround time ends when the supplier has completed the sequencing and notified that the results are ready. services 73110000 73111000 anyw-eea 48 LOT-0005 false no-eu-funds poi-exa 70 price Total comparison price Total comparison price from the Annex 2 “Prices”, sheet “Prices LOT7 (Whole genome) cell I27. poi-exa 30 quality Quality of the service Annex 3 “Additional services”, tenderer’s points cell E23. ORG-0002 ORG-0001 true false none fa-mix 7-4 7. Whole genome sequencing short reads Provider for sequencing services for whole genome sequencing. a. Viruses (DNA, RNA) b. Viruses with host (DNA and RNA) c. Bacteria d. Fungi e. Plants f. Animals Maximum turnaround time is 3 weeks. Turnaround time begings when the supplier has received the sample. Turnaround time ends when the supplier has completed the sequencing and notified that the results are ready. Maximum turnaround time applies when there are equal or less than 5 samples. If there are more than 5 samples the supplier must give estimation of the turnaround time. services 73110000 73111000 anyw-eea 48 LOT-0006 false no-eu-funds poi-exa 70 price Total comparison price Total comparison price from the Annex 2 “Prices”, sheet “Prices LOT9 (Sequence only) cell I25. poi-exa 30 quality Quality of the service Annex 3 “Additional services”, tenderer’s points cell E23. ORG-0002 ORG-0001 true false none fa-mix 9-5 9. Sequencing of self-made pooled libraries short reads (medium through put) Provider for sequencing services for sequencing of self-made pooled libraries. Sequencing of libraries which customer has prepared (e.g. metagenomes, genomes, amplicons, metatranscriptomes transcriptome etc.) using short read (Illumina, AVITI or similar). Maximum turnaround time is 3 weeks. Turnaround time begins when the supplier has received the sample. Turnaround time ends when the supplier has completed the sequencing and notified that the results are ready. services 73110000 73111000 anyw-eea 48 LOT-0007 false no-eu-funds poi-exa 60 price Total comparison price Total comparison price from the Annex 2 “Prices”, sheet “Prices LOT3 (Transcriptomic) cell I24. poi-exa 40 quality Quality of the service Annex 3 “Additional services”, tenderer’s points cell E23. ORG-0002 ORG-0001 true false none fa-mix 3-6 3. Transcriptomic long reads with =Q30 (80%) Provider for sequencing services for transcriptomic. (RNA extracted from e.g. different tissues of plant or animals or soil.) Transcriptomic library preparation using totalRNA as starting material for e.g. total RNA metatranscriptomics, gene expression profiling, rRNA depletion or Poly A (+) RNA enrichment , lncRNA, miRNA. Sequencing of libraries using Illumina/AVITI or similar or Pac-Bio or similar. Maximum turnaround time is 4 weeks. Turnaround time begins when the supplier has received the sample and has checked the sample quality (quality check must be done within 2 workdays). Turnaround time ends when the supplier has completed the sequencing and notified that the results are ready. Maximum turnaround time applies when there are equal or less than 8 samples. If there are more than 8 samples the supplier must give estimation of the turnaround time. Minimum of Q30 as a quality measure. services 73110000 73111000 anyw-eea 48 LOT-0008 false no-eu-funds poi-exa 70 price Total comparison price Total comparison price from the Annex 2 “Prices”, sheet “Prices LOT5 (Amplicon Metabar) cell I27. poi-exa 30 quality Quality of the service Annex 3 “Additional services”, tenderer’s points cell E23. ORG-0002 ORG-0001 true false none fa-mix 5-7 5. Amplicon and metabarcoding long reads with =Q30 (80%) Provider for sequencing services for amplicons and metabarcoding from various sources. (The sample matrix is DNA or eDNA.), including: a. Fungi b. Bacteria c. Animals, protozoa, microscopic animals d. Animal droppings (mammalian identification) e. Plants Amplicons and metabarcoding. PCR of gene of interest, including but not limited to 16S rRNA, 18S rRNA, COI, ITS from bacteria, archaea, fungi, protist, fish, mammals, insects. Maximum turnaround time is 4 weeks. Turnaround time begins when the supplier has received the sample and has checked the sample quality (quality check must be done within 2 workdays). Turnaround time ends when the supplier has completed the sequencing and notified that the results are ready. Maximum turnaround time applies when there are equal or less than 192 samples. If there are more than 192 samples the supplier must give estimation of the turnaround time. Minimum of Q30 as a quality measure. services 73110000 73111000 anyw-eea 48 LOT-0009 false no-eu-funds poi-exa 70 price Total comparison price Total comparison price from the Annex 2 “Prices”, sheet “Prices LOT8 (Whole genome) cell I27. poi-exa 30 quality Quality of the service Annex 3 “Additional services”, tenderer’s points cell E23. ORG-0002 ORG-0001 true false none fa-mix 8 8. Whole genome sequencing long reads Provider for sequencing services for whole genome sequencing. a. Viruses (DNA, RNA) b. Viruses with host (DNA and RNA) c. Bacteria d. Fungi e. Plants f. Animals Maximum turnaround time is 3 weeks. Turnaround time begins when the supplier has received the sample. Turnaround time ends when the supplier has completed the sequencing and notified that the results are ready. Maximum turnaround time applies when there are equal or less than 5 samples. If there are more than 5 samples the supplier must give estimation of the turnaround time. services 73110000 73111000 anyw-eea 48 LOT-0010 false no-eu-funds poi-exa 70 price Total comparison price Total comparison price from the Annex 2 “Prices”, sheet “Prices LOT10 (Sequence only) cell I26. poi-exa 30 quality Quality of the service Annex 3 “Additional services”, tenderer’s points cell E23. ORG-0002 ORG-0001 true false none fa-mix 10-9 10. Sequencing of self-made pooled libraries short reads (high through put) Provider for sequencing services for sequencing of self-made pooled libraries. Sequencing of libraries which customer has prepared (e.g. metagenomes, genomes, amplicons, metatranscriptomes transcriptome etc.) using short read (Illumina, AVITI or similar). Maximum turnaround time is 3 weeks. Turnaround time begins when the supplier has received the sample. Turnaround time ends when the supplier has completed the sequencing and notified that the results are ready. services 73110000 73111000 anyw-eea 48 LOT-0011 false no-eu-funds poi-exa 70 price Total comparison price Total comparison price from the Annex 2 “Prices”, sheet “Prices LOT13 (ATAC) cell I25. poi-exa 30 quality Quality of the service Annex 3 “Additional services”, tenderer’s points cell E23. ORG-0002 ORG-0001 true false none fa-mix 13-10 13. ATAC Provider for sequencing services for ATAC. Maximum turnaround time is 4 weeks. Turnaround time begings when the supplier has received the sample and has checked the sample quality (quality check must be done within 2 workdays). Turnaround time ends when the supplier has completed the sequencing and notified that the results are ready. services 73110000 73111000 anyw-eea 48 LOT-0012 false no-eu-funds poi-exa 70 price Total comparison price Total comparison price from the Annex 2 “Prices”, sheet “Prices LOT11 (Sequence only) cell I24. poi-exa 30 quality Quality of the service Annex 3 “Additional services”, tenderer’s points cell E23. ORG-0002 ORG-0001 true false none fa-mix 11 11. Sequencing of self-made pooled libraries short reads (low through put) Provider for sequencing services for sequencing of self-made pooled libraries. Sequencing of libraries which customer has prepared (e.g. metagenomes, genomes, amplicons, metatranscriptomes transcriptome etc.) using short read (Illumina, AVITI or similar). Maximum turnaround time is 3 weeks. Turnaround time begins when the supplier has received the sample. Turnaround time ends when the supplier has completed the sequencing and notified that the results are ready. services 73110000 73111000 anyw-eea 48 LOT-0013 false no-eu-funds poi-exa 70 price Total comparison price Total comparison price from the Annex 2 “Prices”, sheet “Prices LOT12 (Sequencing long) cell I23. poi-exa 30 quality Quality of the service Annex 3 “Additional services”, tenderer’s points cell E23. ORG-0002 ORG-0001 true false none fa-mix 12 12. Sequencing of self-made pooled libraries long reads with =Q30 (80%) Provider for sequencing services for sequencing of self-made pooled libraries. Sequencing of libraries which customer has prepared (e.g. metagenomes, genomes, amplicons, metatranscriptomes transcriptome etc.) using long read (PacBio or similar). Maximum turnaround time is 3 weeks. Turnaround time begings when the supplier has received the sample. Turnaround time ends when the supplier has completed the sequencing and notified that the results are ready. services 73110000 73111000 anyw-eea 48 2000-01-01Z